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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015938555.1_cds_XP_016483379.1_74498
CDS Infomation

[gene=LOC107804078] [db_xref=GeneID:107804078] [protein=UDP-sugar pyrophosphorylase-like] [protein_id=XP_016483379.1] [location=join(7347..7451,7641..7745,9736..9852,10724..10864,11112..11211,11903..12030,12110..12181,12307..12371,13029..13089,13201..13318,19518..19642,20318..20394,21536..21641,21749..21808,23051..23131,23802..24041,24232..24399)] [gbkey=CDS]
Sequence

ATGACATCGACGGCGGGTGAATTCTCGAAGCTTAACATTAATGGCGATTGGGCTTCCTCT
GCTCCAAATCTCCAGAAAAACCTCTCTCTTCTCTCCCCTGAACAGGTAGAGTTAGCGAAG
ATGTTGTTAGAGAAGGAGCAAAGCCACTTGTTTCAGCACTGGTCGGAGCCCGGAGTTAAT
GATGATGAGAAGCGTGCCTTTTTTGATCAGATTGCCAAACTTAATTCAAGTTATCCTGGG
GGTTTGGTAGCATATGTTAACACTGCTAGGGAGCTTTTAGCTGATTCAAAGGCTGGAAAA
AACCCGTATGATGGTTTTACACCTTCCGTTCCATCTGGGGAGGTTCTGACATATGGTGAT
GATAACTTTGTTCAATTTGAGGAAGCTGGCGTCAAAGAAGCACGGAAGGCTGCATTTGTT
CTTGTTGCTGGAGGCCTCGGAGAACGTCTTGGGTACAACGGAATAAAGGTGGCCCTTCCT
AGAGAAACAACTACAGGGACATGCTTCTTACAGCATTACATTGAAACTATTCTTGCTTTA
CAAGAAGCTAGTTGCAGCCTTGCCGAAGGCAACTGCCAACCGGAGATTCCTTTGGCTATT
ATGACGTCAGATGACACACATTTACGTACCATGGAGCTCTTAGGAAAAAACTCCTTTTTT
GGGATGAAACCCACACAAGTGAAACTGCTTAAGCAGGAAAAAGTTGCTTGTTTAGATGAT
AATGAAGCACACCTTGCTCTGGACCCCCATAATAAATATAGAATTCAGACAAAACCTCAT
GGCCATGGAGACGTCCACTCACTTCTTTACTCAAGTGGTCTTCTTAAAGTTTGGCATGAT
GCAGGCTTAAGATGGGTTCTTTTTTTCCAAGACACCAATGGTCTACTTTTCAAGGCAATT
CCAGCAGCGCTAGGTGTCAGCGCGATAAAACAATACCATGTCAATTCTCTTGCTGTTCCT
CGGAAAGCGAAAGAAGCCATTGGTGGCATTACCAAGCTTACTCATAAAGATGGGCGAACA
ATGGTGATTAATGTGGAATACAACCAGCTCGATCCGTTGCTTAGAGCTTCTGGATATCCT
GATGGTGATGTCAATTCTGAAACAGGCTATTCACCTTTTCCTGGAAATATAAATCAGCTG
ATCTTTGAAATTGGCCCTTACATTGAAGAGCTCACTAAAACAGGAGGTGCAATAAAGGAG
TTTGTTAACCCTAAGTACAAAGATGCTACCAAAACTGCTTTCAAGTCCTCAACTCGACTT
GAATGCATGATGCAAGATTATCCTAAAACGCTGCCTCCATCAGCTAGGGTTGGATTCACT
GTAATGGATGCTTGGCTTGCTTATGCACCTGTGAAAAACAACCCAGAAGATGCTGCCAAG
GTGCCGAAAGGAAATCCATATCACAGTGCCACTTCAGGAGAAATGGCCATATATCGCTCT
CATAGCCTCATTCTAAGAAAGGCTGGTGTCAAGATAGATGATCCGGTTATTCAAGTCTTT
AACGGACAGGAGGTGGAAGTATGGTCTCGAGTTGTGTGGAAGCCGAAATGGGCGCTTACT
TTCTCGGAAGTAAAAAGCAAAGTGAGTGGAAACTGCTCCATTTCACAAAGATCTACAATG
GCAATCAAGGGGCGAGATATTGCCCTTGAGGATCTTTCCCTGGATGGAGCTCTCATTACT
GAGGCTGTCGATGGTGCTGAGGTGAAAGTGGGAGGTTCTGTGCAGAACAAGGGTTGGACA
ATTGAAAATGTCGACTATAAGGAGACTTCAATACCAGAAGAAATAAGAATCAGGGGTTTC
AGATTCAACAAGGTTGAGCAGTTGGAGAAAACATATACCGATCCCGGAAAATATTTTTTG
AAGCCATAA

Peptide Sequence

PEP ID

XP_016483379.1
PEP Infomation

PREDICTED: UDP-sugar pyrophosphorylase-like [Nicotiana tabacum]
Sequence

MTSTAGEFSKLNINGDWASSAPNLQKNLSLLSPEQVELAKMLLEKEQSHLFQHWSEPGVN
DDEKRAFFDQIAKLNSSYPGGLVAYVNTARELLADSKAGKNPYDGFTPSVPSGEVLTYGD
DNFVQFEEAGVKEARKAAFVLVAGGLGERLGYNGIKVALPRETTTGTCFLQHYIETILAL
QEASCSLAEGNCQPEIPLAIMTSDDTHLRTMELLGKNSFFGMKPTQVKLLKQEKVACLDD
NEAHLALDPHNKYRIQTKPHGHGDVHSLLYSSGLLKVWHDAGLRWVLFFQDTNGLLFKAI
PAALGVSAIKQYHVNSLAVPRKAKEAIGGITKLTHKDGRTMVINVEYNQLDPLLRASGYP
DGDVNSETGYSPFPGNINQLIFEIGPYIEELTKTGGAIKEFVNPKYKDATKTAFKSSTRL
ECMMQDYPKTLPPSARVGFTVMDAWLAYAPVKNNPEDAAKVPKGNPYHSATSGEMAIYRS
HSLILRKAGVKIDDPVIQVFNGQEVEVWSRVVWKPKWALTFSEVKSKVSGNCSISQRSTM
AIKGRDIALEDLSLDGALITEAVDGAEVKVGGSVQNKGWTIENVDYKETSIPEEIRIRGF
RFNKVEQLEKTYTDPGKYFLKP

Transcript Sequence

Gene sequence data has not been registered.